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At-TAX: A Whole Genome Tiling Array Resource for Developmental Expression Analysis and Transcript Identification in Arabidopsis thaliana

2008

Article

ei


Gene expression maps for model organisms, including Arabidopsis thaliana, have typically been created using gene-centric expression arrays. Here, we describe a comprehensive expression atlas, Arabidopsis thaliana Tiling Array Express (At-TAX), which is based on whole-genome tiling arrays. We demonstrate that tiling arrays are accurate tools for gene expression analysis and identified more than 1,000 unannotated transcribed regions. Visualizations of gene expression estimates, transcribed regions, and tiling probe measurements are accessible online at the At-TAX homepage.

Author(s): Laubinger, S. and Zeller, G. and Henz, SR. and Sachsenberg, T. and Widmer, CK. and Naouar, N. and Vuylsteke, M. and Schölkopf, B. and Rätsch, G. and Weigel, D.
Journal: Genome Biology
Volume: 9
Number (issue): 7: R112
Pages: 1-16
Year: 2008
Month: July
Day: 0

Department(s): Empirical Inference
Bibtex Type: Article (article)

Digital: 0
DOI: 10.1186/gb-2008-9-7-r112
Language: en
Organization: Max-Planck-Gesellschaft
School: Biologische Kybernetik

Links: PDF

BibTex

@article{5325,
  title = {At-TAX: A Whole Genome Tiling Array Resource for Developmental Expression Analysis and Transcript Identification in Arabidopsis thaliana},
  author = {Laubinger, S. and Zeller, G. and Henz, SR. and Sachsenberg, T. and Widmer, CK. and Naouar, N. and Vuylsteke, M. and Sch{\"o}lkopf, B. and R{\"a}tsch, G. and Weigel, D.},
  journal = {Genome Biology},
  volume = {9},
  number = {7: R112},
  pages = {1-16},
  organization = {Max-Planck-Gesellschaft},
  school = {Biologische Kybernetik},
  month = jul,
  year = {2008},
  month_numeric = {7}
}