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2019


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Semi-supervised learning, causality, and the conditional cluster assumption

von Kügelgen, J., Mey, A., Loog, M., Schölkopf, B.

NeurIPS 2019 Workshop “Do the right thing”: machine learning and causal inference for improved decision making, December 2019 (poster)

link (url) [BibTex]

2019

link (url) [BibTex]


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Optimal experimental design via Bayesian optimization: active causal structure learning for Gaussian process networks

von Kügelgen, J., Rubenstein, P. K., Schölkopf, B., Weller, A.

NeurIPS 2019 Workshop “Do the right thing”: machine learning and causal inference for improved decision making, December 2019 (poster) Accepted

link (url) [BibTex]

link (url) [BibTex]


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Perception of temporal dependencies in autoregressive motion

Meding, K., Schölkopf, B., Wichmann, F. A.

European Conference on Visual Perception (ECVP), 2019 (poster)

[BibTex]


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Phenomenal Causality and Sensory Realism

Bruijns, S. A., Meding, K., Schölkopf, B., Wichmann, F. A.

European Conference on Visual Perception (ECVP), 2019 (poster)

[BibTex]

[BibTex]

2016


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Autofocusing-based correction of B0 fluctuation-induced ghosting

Loktyushin, A., Ehses, P., Schölkopf, B., Scheffler, K.

24th Annual Meeting and Exhibition of the International Society for Magnetic Resonance in Medicine (ISMRM), May 2016 (poster)

link (url) [BibTex]

2016

link (url) [BibTex]


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Novel Random Forest based framework enables the segmentation of cerebral ischemic regions using multiparametric MRI

Katiyar, P., Castaneda, S., Patzwaldt, K., Russo, F., Poli, S., Ziemann, U., Disselhorst, J. A., Pichler, B. J.

European Molecular Imaging Meeting, 2016 (poster)

link (url) [BibTex]

link (url) [BibTex]


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PGO wave-triggered functional MRI: mapping the networks underlying synaptic consolidation

Logothetis, N. K., Murayama, Y., Ramirez-Villegas, J. F., Besserve, M., Evrard, H.

47th Annual Meeting of the Society for Neuroscience (Neuroscience), 2016 (poster)

[BibTex]

[BibTex]


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Analysis of multiparametric MRI using a semi-supervised random forest framework allows the detection of therapy response in ischemic stroke

Castaneda, S., Katiyar, P., Russo, F., Calaminus, C., Disselhorst, J. A., Ziemann, U., Kohlhofer, U., Quintanilla-Martinez, L., Poli, S., Pichler, B. J.

World Molecular Imaging Conference, 2016 (talk)

link (url) [BibTex]

link (url) [BibTex]


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Multiparametric Imaging of Ischemic Stroke using [89Zr]-Desferal-EPO-PET/MRI in combination with Gaussian Mixture Modeling enables unsupervised lesions identification

Castaneda, S., Katiyar, P., Russo, F., Maurer, A., Patzwaldt, K., Poli, S., Calaminus, C., Disselhorst, J. A., Ziemann, U., Pichler, B. J.

European Molecular Imaging Meeting, 2016 (poster)

link (url) [BibTex]

link (url) [BibTex]


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Statistical source separation of rhythmic LFP patterns during sharp wave ripples in the macaque hippocampus

Ramirez-Villegas, J. F., Logothetis, N. K., Besserve, M.

47th Annual Meeting of the Society for Neuroscience (Neuroscience), 2016 (poster)

[BibTex]

[BibTex]


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Screening Rules for Convex Problems

Raj, A., Olbrich, J., Gärtner, B., Schölkopf, B., Jaggi, M.

2016 (unpublished) Submitted

[BibTex]

[BibTex]


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Multi-view learning on multiparametric PET/MRI quantifies intratumoral heterogeneity and determines therapy efficacy

Katiyar, P., Divine, M. R., Kohlhofer, U., Quintanilla-Martinez, L., Siegemund, M., Pfizenmaier, K., Kontermann, R., Pichler, B. J., Disselhorst, J. A.

World Molecular Imaging Conference, 2016 (talk)

link (url) [BibTex]

link (url) [BibTex]


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Hippocampal neural events predict ongoing brain-wide BOLD activity

Besserve, M., Logothetis, N. K.

47th Annual Meeting of the Society for Neuroscience (Neuroscience), 2016 (poster)

[BibTex]

[BibTex]

2015


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Diversity of sharp wave-ripples in the CA1 of the macaque hippocampus and their brain wide signatures

Ramirez-Villegas, J. F., Logothetis, N. K., Besserve, M.

45th Annual Meeting of the Society for Neuroscience (Neuroscience 2015), October 2015 (poster)

link (url) [BibTex]

2015

link (url) [BibTex]


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Causal Inference for Empirical Time Series Based on the Postulate of Independence of Cause and Mechanism

Besserve, M.

53rd Annual Allerton Conference on Communication, Control, and Computing, September 2015 (talk)

[BibTex]

[BibTex]


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Retrospective rigid motion correction of undersampled MRI data

Loktyushin, A., Babayeva, M., Gallichan, D., Krueger, G., Scheffler, K., Kober, T.

23rd Annual Meeting and Exhibition of the International Society for Magnetic Resonance in Medicine, ISMRM, June 2015 (poster)

[BibTex]

[BibTex]


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Improving Quantitative Susceptibility and R2* Mapping by Applying Retrospective Motion Correction

Feng, X., Loktyushin, A., Deistung, A., Reichenbach, J. R.

23rd Annual Meeting and Exhibition of the International Society for Magnetic Resonance in Medicine, ISMRM, June 2015 (poster)

[BibTex]

[BibTex]


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Independence of cause and mechanism in brain networks

Besserve, M.

DALI workshop on Networks: Processes and Causality, April 2015 (talk)

[BibTex]

[BibTex]


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Increasing the sensitivity of Kepler to Earth-like exoplanets

Foreman-Mackey, D., Hogg, D., Schölkopf, B., Wang, D.

Workshop: 225th American Astronomical Society Meeting 2015 , pages: 105.01D, 2015 (poster)

Web link (url) [BibTex]

Web link (url) [BibTex]


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Information-Theoretic Implications of Classical and Quantum Causal Structures

Chaves, R., Majenz, C., Luft, L., Maciel, T., Janzing, D., Schölkopf, B., Gross, D.

18th Conference on Quantum Information Processing (QIP), 2015 (talk)

Web link (url) [BibTex]

Web link (url) [BibTex]


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Calibrating the pixel-level Kepler imaging data with a causal data-driven model

Wang, D., Foreman-Mackey, D., Hogg, D., Schölkopf, B.

Workshop: 225th American Astronomical Society Meeting 2015 , pages: 258.08, 2015 (poster)

Web link (url) [BibTex]

Web link (url) [BibTex]


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Assessment of brain tissue damage in the Sub-Acute Stroke Region by Multiparametric Imaging using [89-Zr]-Desferal-EPO-PET/MRI

Castaneda, S. G., Katiyar, P., Russo, F., Disselhorst, J. A., Calaminus, C., Poli, S., Maurer, A., Ziemann, U., Pichler, B. J.

World Molecular Imaging Conference, 2015 (talk)

[BibTex]

[BibTex]


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Early time point in vivo PET/MR is a promising biomarker for determining efficacy of a novel Db(\alphaEGFR)-scTRAIL fusion protein therapy in a colon cancer model

Divine, M. R., Harant, M., Katiyar, P., Disselhorst, J. A., Bukala, D., Aidone, S., Siegemund, M., Pfizenmaier, K., Kontermann, R., Pichler, B. J.

World Molecular Imaging Conference, 2015 (talk)

[BibTex]

[BibTex]


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Assessment of tumor heterogeneity using unsupervised graph based clustering of multi-modality imaging data

Katiyar, P., Divine, M. R., Pichler, B. J., Disselhorst, J. A.

European Molecular Imaging Meeting, 2015 (poster)

[BibTex]

[BibTex]


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Disparity estimation from a generative light field model

Köhler, R., Schölkopf, B., Hirsch, M.

IEEE International Conference on Computer Vision (ICCV 2015), Workshop on Inverse Rendering, 2015, Note: This work has been presented as a poster and is not included in the workshop proceedings. (poster)

[BibTex]

[BibTex]


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The search for single exoplanet transits in the Kepler light curves

Foreman-Mackey, D., Hogg, D. W., Schölkopf, B.

IAU General Assembly, 22, pages: 2258352, 2015 (talk)

link (url) [BibTex]

link (url) [BibTex]

1998


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Masking by plaid patterns: effects of presentation time and mask contrast

Wichmann, F., Henning, G.

pages: 115, 1. T{\"u}binger Wahrnehmungskonferenz (TWK 98), February 1998 (poster)

Abstract
Most current models of early spatial vision comprise of sets of orientation- and spatial-frequency selective filters with our without limited non-linear interactions amongst different subsets of the filters. The performance of human observers and of such models for human spatial vision were compared in experiments using maskers with two spatial frequencies (plaid masks). The detectability of horizontally orientated sinusoidal signals at 3.02 c/deg was measured in standard 2AFC-tasks in the presence of plaid patterns with two-components at the same spatial frequency as the signal but at different orientations (+/- 15, 30, 45, and 75 deg from the signal) and with varying contrasts (1.0, 6.25 and 25.0% contrast). In addition, the temporal envelope of the stimulus presentation was either a rectangular pulse of 19.7 msec duration, or a temporal Hanning window of 1497 msec.Threshold elevation varied with plaid component orientation, peaked +/- 30 deg from the signal where nearly a log unit threshold elevation for the 25.0% contrast plaid was observed. For plaids with 1.0% contrast we observed significant facilitation even with plaids whose components were 75 deg from that of the signal. Elevation factors were somewhat lower for the short stimulus presentation time but were still significant (up to a factor of 5 or 6). Despite of the simple nature of the stimuli employed in this study-sinusoidal signal and plaid masks comprised of only two sinusoids-none of the current models of early spatial vision can fully account for all the data gathered.

Web [BibTex]

1998

Web [BibTex]


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A bootstrap method for testing hypotheses concerning psychometric functions

Hill, N., Wichmann, F.

1998 (poster)

Abstract
Whenever psychometric functions are used to evaluate human performance on some task, it is valuable to examine not only the threshold and slope values estimated from the original data, but also the expected variability in those measures. This allows psychometric functions obtained in two experimental conditions to be compared statistically. We present a method for estimating the variability of thresholds and slopes of psychometric functions. This involves a maximum-likelihood fit to the data using a three-parameter mathematical function, followed by Monte Carlo simulation using the first fit as a generating function for the simulations. The variability of the function's parameters can then be estimated (as shown by Maloney, 1990), as can the variability of the threshold value (Foster & Bischof, 1997). We will show how a simple development of this procedure can be used to test the significance of differences between (a) the thresholds, and (b) the slopes of two psychometric functions. Further, our method can be used to assess the assumptions underlying the original fit, by examining how goodness-of-fit differs in simulation from its original value. In this way data sets can be identified as being either too noisy to be generated by a binomial observer, or significantly "too good to be true." All software is written in MATLAB and is therefore compatible across platforms, with the option of accelerating performance using MATLAB's plug-in binaries, or "MEX" files.

[BibTex]


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Support Vector methods in learning and feature extraction

Schölkopf, B., Smola, A., Müller, K., Burges, C., Vapnik, V.

Ninth Australian Conference on Neural Networks, pages: 72-78, (Editors: T. Downs, M. Frean and M. Gallagher), 1998 (talk)

[BibTex]

[BibTex]


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Nonlinearities and the pedestal effect

Wichmann, F., Henning, G., Ploghaus, A.

Perception, 27, pages: S86, 1998 (poster)

Abstract
Psychophysical and physiological evidence suggests that luminance patterns are independently analysed in "channels" responding to different bands of spatial frequency. There are, however, interactions among stimuli falling well outside the usual estimates of channels' bandwidths (Henning, Hertz, and Broadbent, (1975). Vision Res., 15, 887-899). We examined whether the masking results of Henning et al. are consistent with independent channels. We postulated, before the channels, a point non-linearity which would introduce distortion products that might produce the observed interactions between stimuli two octaves apart in spatial frequency. Standard 2-AFC masking experiments determined whether possible distortion products of a 4.185 c/deg masking sinusoid revealed their presence through effects on the detection of a sinusoidal signal at the frequency of the second harmonic of the masker-8.37 c/deg. The signal and masker were horizontally orientated and the signal was in-phase, out-of-phase, or in quadrature with the putative second-order distortion product of the masker. Significant interactions between signal and masker were observed: for a wide range of masker contrasts, signal detection was facilitated by the masking stimulus. However, the shapes of the functions relating detection performance to masker contrast, as well as the effects of relative phase, were inconsistent with the notion that distortion products were responsible for the interactions observed.

[BibTex]

[BibTex]