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2016


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Special Issue on Causal Discovery and Inference

Zhang, K., Li, J., Bareinboim, E., Schölkopf, B., Pearl, J.

ACM Transactions on Intelligent Systems and Technology (TIST), 7(2), January 2016, (Guest Editors) (misc)

[BibTex]

2016

[BibTex]


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Empirical Inference (2010-2015)
Scientific Advisory Board Report, 2016 (misc)

pdf [BibTex]

pdf [BibTex]


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Unsupervised Domain Adaptation in the Wild : Dealing with Asymmetric Label Set

Mittal, A., Raj, A., Namboodiri, V. P., Tuytelaars, T.

2016 (misc)

Arxiv [BibTex]


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Nonlinear functional causal models for distinguishing cause from effect

Zhang, K., Hyvärinen, A.

In Statistics and Causality: Methods for Applied Empirical Research, pages: 185-201, 8, 1st, (Editors: Wolfgang Wiedermann and Alexander von Eye), John Wiley & Sons, Inc., 2016 (inbook)

[BibTex]

[BibTex]


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Analysis of multiparametric MRI using a semi-supervised random forest framework allows the detection of therapy response in ischemic stroke

Castaneda, S., Katiyar, P., Russo, F., Calaminus, C., Disselhorst, J. A., Ziemann, U., Kohlhofer, U., Quintanilla-Martinez, L., Poli, S., Pichler, B. J.

World Molecular Imaging Conference, 2016 (talk)

link (url) [BibTex]

link (url) [BibTex]


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A cognitive brain–computer interface for patients with amyotrophic lateral sclerosis

Hohmann, M., Fomina, T., Jayaram, V., Widmann, N., Förster, C., Just, J., Synofzik, M., Schölkopf, B., Schöls, L., Grosse-Wentrup, M.

In Brain-Computer Interfaces: Lab Experiments to Real-World Applications, 228(Supplement C):221-239, 8, Progress in Brain Research, (Editors: Damien Coyle), Elsevier, 2016 (incollection)

DOI Project Page [BibTex]

DOI Project Page [BibTex]


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Screening Rules for Convex Problems

Raj, A., Olbrich, J., Gärtner, B., Schölkopf, B., Jaggi, M.

2016 (unpublished) Submitted

[BibTex]

[BibTex]


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Multi-view learning on multiparametric PET/MRI quantifies intratumoral heterogeneity and determines therapy efficacy

Katiyar, P., Divine, M. R., Kohlhofer, U., Quintanilla-Martinez, L., Siegemund, M., Pfizenmaier, K., Kontermann, R., Pichler, B. J., Disselhorst, J. A.

World Molecular Imaging Conference, 2016 (talk)

link (url) [BibTex]

link (url) [BibTex]

2015


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easyGWAS: An Integrated Computational Framework for Advanced Genome-Wide Association Studies

Grimm, Dominik

Eberhard Karls Universität Tübingen, November 2015 (phdthesis)

[BibTex]

2015

[BibTex]


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Causal Discovery Beyond Conditional Independences

Sgouritsa, E.

Eberhard Karls Universität Tübingen, Germany, October 2015 (phdthesis)

link (url) [BibTex]

link (url) [BibTex]


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Causal Inference for Empirical Time Series Based on the Postulate of Independence of Cause and Mechanism

Besserve, M.

53rd Annual Allerton Conference on Communication, Control, and Computing, September 2015 (talk)

[BibTex]

[BibTex]


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From Points to Probability Measures: A Statistical Learning on Distributions with Kernel Mean Embedding

Muandet, K.

University of Tübingen, Germany, University of Tübingen, Germany, September 2015 (phdthesis)

[BibTex]

[BibTex]


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Machine Learning Approaches to Image Deconvolution

Schuler, C.

University of Tübingen, Germany, University of Tübingen, Germany, September 2015 (phdthesis)

[BibTex]

[BibTex]


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Kernel methods in medical imaging

Charpiat, G., Hofmann, M., Schölkopf, B.

In Handbook of Biomedical Imaging, pages: 63-81, 4, (Editors: Paragios, N., Duncan, J. and Ayache, N.), Springer, Berlin, Germany, June 2015 (inbook)

Web link (url) [BibTex]

Web link (url) [BibTex]


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Blind Retrospective Motion Correction of MR Images

Loktyushin, A.

University of Tübingen, Germany, May 2015 (phdthesis)

[BibTex]

[BibTex]


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Independence of cause and mechanism in brain networks

Besserve, M.

DALI workshop on Networks: Processes and Causality, April 2015 (talk)

[BibTex]

[BibTex]


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Information-Theoretic Implications of Classical and Quantum Causal Structures

Chaves, R., Majenz, C., Luft, L., Maciel, T., Janzing, D., Schölkopf, B., Gross, D.

18th Conference on Quantum Information Processing (QIP), 2015 (talk)

Web link (url) [BibTex]

Web link (url) [BibTex]


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Assessment of brain tissue damage in the Sub-Acute Stroke Region by Multiparametric Imaging using [89-Zr]-Desferal-EPO-PET/MRI

Castaneda, S. G., Katiyar, P., Russo, F., Disselhorst, J. A., Calaminus, C., Poli, S., Maurer, A., Ziemann, U., Pichler, B. J.

World Molecular Imaging Conference, 2015 (talk)

[BibTex]

[BibTex]


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Statistical and Machine Learning Methods for Neuroimaging: Examples, Challenges, and Extensions to Diffusion Imaging Data

O’Donnell, L. J., Schultz, T.

In Visualization and Processing of Higher Order Descriptors for Multi-Valued Data, pages: 299-319, (Editors: Hotz, I. and Schultz, T.), Springer, 2015 (inbook)

[BibTex]

[BibTex]


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A Cognitive Brain-Computer Interface for Patients with Amyotrophic Lateral Sclerosis

Hohmann, M.

Graduate Training Centre of Neuroscience, University of Tübingen, Germany, 2015 (mastersthesis)

[BibTex]

[BibTex]


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Early time point in vivo PET/MR is a promising biomarker for determining efficacy of a novel Db(\alphaEGFR)-scTRAIL fusion protein therapy in a colon cancer model

Divine, M. R., Harant, M., Katiyar, P., Disselhorst, J. A., Bukala, D., Aidone, S., Siegemund, M., Pfizenmaier, K., Kontermann, R., Pichler, B. J.

World Molecular Imaging Conference, 2015 (talk)

[BibTex]

[BibTex]


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Sequential Image Deconvolution Using Probabilistic Linear Algebra

Gao, M.

Technical University of Munich, Germany, 2015 (mastersthesis)

[BibTex]

[BibTex]


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Causal Inference in Neuroimaging

Casarsa de Azevedo, L.

Graduate Training Centre of Neuroscience, University of Tübingen, Germany, 2015 (mastersthesis)

[BibTex]

[BibTex]


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The effect of frowning on attention

Ibarra Chaoul, A.

Graduate Training Centre of Neuroscience, University of Tübingen, Germany, 2015 (mastersthesis)

[BibTex]

[BibTex]


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Justifying Information-Geometric Causal Inference

Janzing, D., Steudel, B., Shajarisales, N., Schölkopf, B.

In Measures of Complexity: Festschrift for Alexey Chervonenkis, pages: 253-265, 18, (Editors: Vovk, V., Papadopoulos, H. and Gammerman, A.), Springer, 2015 (inbook)

DOI [BibTex]

DOI [BibTex]


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The search for single exoplanet transits in the Kepler light curves

Foreman-Mackey, D., Hogg, D. W., Schölkopf, B.

IAU General Assembly, 22, pages: 2258352, 2015 (talk)

link (url) [BibTex]

link (url) [BibTex]

2002


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Nonlinear Multivariate Analysis with Geodesic Kernels

Kuss, M.

Biologische Kybernetik, Technische Universität Berlin, February 2002 (diplomathesis)

GZIP [BibTex]

2002

GZIP [BibTex]


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Concentration Inequalities and Empirical Processes Theory Applied to the Analysis of Learning Algorithms

Bousquet, O.

Biologische Kybernetik, Ecole Polytechnique, 2002 (phdthesis) Accepted

Abstract
New classification algorithms based on the notion of 'margin' (e.g. Support Vector Machines, Boosting) have recently been developed. The goal of this thesis is to better understand how they work, via a study of their theoretical performance. In order to do this, a general framework for real-valued classification is proposed. In this framework, it appears that the natural tools to use are Concentration Inequalities and Empirical Processes Theory. Thanks to an adaptation of these tools, a new measure of the size of a class of functions is introduced, which can be computed from the data. This allows, on the one hand, to better understand the role of eigenvalues of the kernel matrix in Support Vector Machines, and on the other hand, to obtain empirical model selection criteria.

PostScript [BibTex]


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Support Vector Machines: Induction Principle, Adaptive Tuning and Prior Knowledge

Chapelle, O.

Biologische Kybernetik, 2002 (phdthesis)

Abstract
This thesis presents a theoretical and practical study of Support Vector Machines (SVM) and related learning algorithms. In a first part, we introduce a new induction principle from which SVMs can be derived, but some new algorithms are also presented in this framework. In a second part, after studying how to estimate the generalization error of an SVM, we suggest to choose the kernel parameters of an SVM by minimizing this estimate. Several applications such as feature selection are presented. Finally the third part deals with the incoporation of prior knowledge in a learning algorithm and more specifically, we studied the case of known invariant transormations and the use of unlabeled data.

GZIP [BibTex]

2000


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Robust ensemble learning

Rätsch, G., Schölkopf, B., Smola, A., Mika, S., Onoda, T., Müller, K.

In Advances in Large Margin Classifiers, pages: 207-220, Neural Information Processing Series, (Editors: AJ Smola and PJ Bartlett and B Schölkopf and D. Schuurmans), MIT Press, Cambridge, MA, USA, October 2000 (inbook)

[BibTex]

2000

[BibTex]


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Entropy numbers for convex combinations and MLPs

Smola, A., Elisseeff, A., Schölkopf, B., Williamson, R.

In Advances in Large Margin Classifiers, pages: 369-387, Neural Information Processing Series, (Editors: AJ Smola and PL Bartlett and B Schölkopf and D Schuurmans), MIT Press, Cambridge, MA,, October 2000 (inbook)

[BibTex]

[BibTex]


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Natural Regularization from Generative Models

Oliver, N., Schölkopf, B., Smola, A.

In Advances in Large Margin Classifiers, pages: 51-60, Neural Information Processing Series, (Editors: AJ Smola and PJ Bartlett and B Schölkopf and D Schuurmans), MIT Press, Cambridge, MA, USA, October 2000 (inbook)

[BibTex]

[BibTex]


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Three-dimensional reconstruction of planar scenes

Urbanek, M.

Biologische Kybernetik, INP Grenoble, Warsaw University of Technology, September 2000 (diplomathesis)

Abstract
For a planar scene, we propose an algorithm to estimate its 3D structure. Homographies between corresponding planes are employed in order to recover camera motion parameters - between camera positions from which images of the scene were taken. Cases of one- and multiple- corresponding planes present on the scene are distinguished. Solutions are proposed for both cases.

ZIP [BibTex]

ZIP [BibTex]


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Solving Satisfiability Problems with Genetic Algorithms

Harmeling, S.

In Genetic Algorithms and Genetic Programming at Stanford 2000, pages: 206-213, (Editors: Koza, J. R.), Stanford Bookstore, Stanford, CA, USA, June 2000 (inbook)

Abstract
We show how to solve hard 3-SAT problems using genetic algorithms. Furthermore, we explore other genetic operators that may be useful to tackle 3-SAT problems, and discuss their pros and cons.

PDF [BibTex]

PDF [BibTex]


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Statistical Learning and Kernel Methods

Schölkopf, B.

In CISM Courses and Lectures, International Centre for Mechanical Sciences Vol.431, CISM Courses and Lectures, International Centre for Mechanical Sciences, 431(23):3-24, (Editors: G Della Riccia and H-J Lenz and R Kruse), Springer, Vienna, Data Fusion and Perception, 2000 (inbook)

[BibTex]

[BibTex]


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Intelligence as a Complex System

Zhou, D.

Biologische Kybernetik, 2000 (phdthesis)

[BibTex]

[BibTex]


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Neural Networks in Robot Control

Peters, J.

Biologische Kybernetik, Fernuniversität Hagen, Hagen, Germany, 2000 (diplomathesis)

[BibTex]

[BibTex]


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An Introduction to Kernel-Based Learning Algorithms

Müller, K., Mika, S., Rätsch, G., Tsuda, K., Schölkopf, B.

In Handbook of Neural Network Signal Processing, 4, (Editors: Yu Hen Hu and Jang-Neng Hwang), CRC Press, 2000 (inbook)

[BibTex]

[BibTex]

1998


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Eine beweistheoretische Anwendung der

Harmeling, S.

Biologische Kybernetik, Westfälische Wilhelms-Universität Münster, Münster, May 1998 (diplomathesis)

PDF [BibTex]

1998

PDF [BibTex]


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Übersicht durch Übersehen

Schölkopf, B.

Frankfurter Allgemeine Zeitung , Wissenschaftsbeilage, March 1998 (misc)

[BibTex]

[BibTex]


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Qualitative Modeling for Data Miner‘s Requirement

Shin, H.

Biologische Kybernetik, Hong-Ik University, Seoul, Korea, February 1998, Written in Korean (diplomathesis)

ZIP [BibTex]

ZIP [BibTex]


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Support Vector Machines for Image Classification

Chapelle, O.

Biologische Kybernetik, Ecole Normale Superieure de Lyon, 1998 (diplomathesis)

GZIP [BibTex]

GZIP [BibTex]


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Support Vector methods in learning and feature extraction

Schölkopf, B., Smola, A., Müller, K., Burges, C., Vapnik, V.

Ninth Australian Conference on Neural Networks, pages: 72-78, (Editors: T. Downs, M. Frean and M. Gallagher), 1998 (talk)

[BibTex]

[BibTex]


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Support-Vektor-Lernen

Schölkopf, B.

In Ausgezeichnete Informatikdissertationen 1997, pages: 135-150, (Editors: G Hotz and H Fiedler and P Gorny and W Grass and S Hölldobler and IO Kerner and R Reischuk), Teubner Verlag, Stuttgart, 1998 (inbook)

[BibTex]

[BibTex]