Publications | Empirical Inference - Max Planck Institute for Intelligent Systems

Lopez-Paz, D. The Randomized Dependence Coefficient (UC Berkeley, MSKCC, MIT, Harvard, 2013) 2014 (talk)

Computational Diffusion MRI and Brain Connectivity

Schultz, T., Nedjati-Gilani, G., Venkataraman, A., O’Donnell, L., Panagiotaki, E.

pages: 255, Mathematics and Visualization, Springer, 2014 (book)

Schultz, T., Nedjati-Gilani, G., Venkataraman, A., O’Donnell, L., Panagiotaki, E. Computational Diffusion MRI and Brain Connectivity pages: 255, Mathematics and Visualization, Springer, 2014 (book)

Unsupervised identification of neural events in local field potentials

Besserve, M., Schölkopf, B., Logothetis, N. K.

44th Annual Meeting of the Society for Neuroscience (Neuroscience), 2014 (talk)

Besserve, M., Schölkopf, B., Logothetis, N. K. Unsupervised identification of neural events in local field potentials 44th Annual Meeting of the Society for Neuroscience (Neuroscience), 2014 (talk)

Quantifying statistical dependency

Besserve, M.

Research Network on Learning Systems Summer School, 2014 (talk)

Besserve, M. Quantifying statistical dependency Research Network on Learning Systems Summer School, 2014 (talk)

Using a population based Gaussian Mixture Model on fused [18]F-FDG PET and DW-MRI images accurately segments the tumor microenvironment into clinically relevant compartments capable of guiding therapy

Divine, M. R., Disselhorst, J. A., Katiyar, P., Pichler, B. J.

European Molecular Imaging Meeting, 2014 (talk)

Divine, M. R., Disselhorst, J. A., Katiyar, P., Pichler, B. J. Using a population based Gaussian Mixture Model on fused [18]F-FDG PET and DW-MRI images accurately segments the tumor microenvironment into clinically relevant compartments capable of guiding therapy European Molecular Imaging Meeting, 2014 (talk)

slides_Monday slides_Tuesday slides_Wednesday slides_Thursday slides_Friday [BibTex]

Causal Inference from Passive Observations

Janzing, D.

24th Summer School University of Jyväskylā, Finland, August, 2014 (talk)

Janzing, D. Causal Inference from Passive Observations 24th Summer School University of Jyväskylā, Finland, August, 2014 (talk)

slides_Monday slides_Tuesday slides_Wednesday slides_Thursday slides_Friday [BibTex]

2004

How to learn from very few examples?

October 2004 (talk)

2004

Zhou, D. How to learn from very few examples? October 2004 (talk)

Discrete vs. Continuous: Two Sides of Machine Learning

October 2004 (talk)

Zhou, D. Discrete vs. Continuous: Two Sides of Machine Learning October 2004 (talk)

Discrete vs. Continuous: Two Sides of Machine Learning

October 2004 (talk)

Abstract

We consider the problem of transductive inference. In many real-world problems, unlabeled data is far easier to obtain than labeled data. Hence transductive inference is very significant in many practical problems. According to Vapnik's point of view, one should predict the function value only on the given points directly rather than a function defined on the whole space, the latter being a more complicated problem. Inspired by this idea, we develop discrete calculus on finite discrete spaces, and then build discrete regularization. A family of transductive algorithms is naturally derived from this regularization framework. We validate the algorithms on both synthetic and real-world data from text/web categorization to bioinformatics problems. A significant by-product of this work is a powerful way of ranking data based on examples including images, documents, proteins and many other kinds of data. This talk is mainly based on the followiing contribution: (1) D. Zhou and B. Sch{\"o}lkopf: Transductive Inference with Graphs, MPI Technical report, August, 2004; (2) D. Zhou, B. Sch{\"o}lkopf and T. Hofmann. Semi-supervised Learning on Directed Graphs. NIPS 2004; (3) D. Zhou, O. Bousquet, T.N. Lal, J. Weston and B. Sch{\"o}lkopf. Learning with Local and Global Consistency. NIPS 2003.

Zhou, D. Discrete vs. Continuous: Two Sides of Machine Learning October 2004 (talk)

Grundlagen von Support Vector Maschinen und Anwendungen in der Bildverarbeitung

Eichhorn, J.

September 2004 (talk)

Abstract

Invited talk at the workshop "Numerical, Statistical and Discrete Methods in Image Processing" at the TU M{\"u}nchen (in GERMAN)

Eichhorn, J. Grundlagen von Support Vector Maschinen und Anwendungen in der Bildverarbeitung September 2004 (talk)

Kernel Methods in Computational Biology

Schölkopf, B., Tsuda, K., Vert, J.

pages: 410, Computational Molecular Biology, MIT Press, Cambridge, MA, USA, August 2004 (book)

Abstract

Modern machine learning techniques are proving to be extremely valuable for the analysis of data in computational biology problems. One branch of machine learning, kernel methods, lends itself particularly well to the difficult aspects of biological data, which include high dimensionality (as in microarray measurements), representation as discrete and structured data (as in DNA or amino acid sequences), and the need to combine heterogeneous sources of information. This book provides a detailed overview of current research in kernel methods and their applications to computational biology. Following three introductory chaptersan introduction to molecular and computational biology, a short review of kernel methods that focuses on intuitive concepts rather than technical details, and a detailed survey of recent applications of kernel methods in computational biologythe book is divided into three sections that reflect three general trends in current research. The first part presents different ideas for the design of kernel functions specifically adapted to various biological data; the second part covers different approaches to learning from heterogeneous data; and the third part offers examples of successful applications of support vector machine methods.

Schölkopf, B., Tsuda, K., Vert, J. Kernel Methods in Computational Biology pages: 410, Computational Molecular Biology, MIT Press, Cambridge, MA, USA, August 2004 (book)

The benefit of liquid Helium cooling for Cryo-Electron Tomography: A quantitative comparative study

Schweikert, G., Luecken, U., Pfeifer, G., Baumeister, W., Plitzko, J.

The thirteenth European Microscopy Congress, August 2004 (talk)

Schweikert, G., Luecken, U., Pfeifer, G., Baumeister, W., Plitzko, J. The benefit of liquid Helium cooling for Cryo-Electron Tomography: A quantitative comparative study The thirteenth European Microscopy Congress, August 2004 (talk)

Riemannian Geometry on Graphs and its Application to Ranking and Classification

June 2004 (talk)

Abstract

Zhou, D. Riemannian Geometry on Graphs and its Application to Ranking and Classification June 2004 (talk)

Learning from Labeled and Unlabeled Data: Semi-supervised Learning and Ranking

January 2004 (talk)

Abstract

We consider the general problem of learning from labeled and unlabeled data, which is often called semi-supervised learning or transductive inference. A principled approach to semi-supervised learning is to design a classifying function which is sufficiently smooth with respect to the intrinsic structure collectively revealed by known labeled and unlabeled points. We present a simple algorithm to obtain such a smooth solution. Our method yields encouraging experimental results on a number of classification problems and demonstrates effective use of unlabeled data.

Zhou, D. Learning from Labeled and Unlabeled Data: Semi-supervised Learning and Ranking January 2004 (talk)

Introduction to Category Theory

Bousquet, O.

Internal Seminar, January 2004 (talk)

Abstract

A brief introduction to the general idea behind category theory with some basic definitions and examples. A perspective on higher dimensional categories is given.

Bousquet, O. Introduction to Category Theory Internal Seminar, January 2004 (talk)

Advanced Statistical Learning Theory

Bousquet, O.

Machine Learning Summer School, 2004 (talk)

Bousquet, O. Advanced Statistical Learning Theory Machine Learning Summer School, 2004 (talk)

2002

Learning with Kernels: Support Vector Machines, Regularization, Optimization, and Beyond

Schölkopf, B., Smola, A.

pages: 644, Adaptive Computation and Machine Learning, MIT Press, Cambridge, MA, USA, December 2002, Parts of this book, including an introduction to kernel methods, can be downloaded here. (book)

Abstract

In the 1990s, a new type of learning algorithm was developed, based on results from statistical learning theory: the Support Vector Machine (SVM). This gave rise to a new class of theoretically elegant learning machines that use a central concept of SVMs-kernelsfor a number of learning tasks. Kernel machines provide a modular framework that can be adapted to different tasks and domains by the choice of the kernel function and the base algorithm. They are replacing neural networks in a variety of fields, including engineering, information retrieval, and bioinformatics. Learning with Kernels provides an introduction to SVMs and related kernel methods. Although the book begins with the basics, it also includes the latest research. It provides all of the concepts necessary to enable a reader equipped with some basic mathematical knowledge to enter the world of machine learning using theoretically well-founded yet easy-to-use kernel algorithms and to understand and apply the powerful algorithms that have been developed over the last few years.

2002

Schölkopf, B., Smola, A. Learning with Kernels: Support Vector Machines, Regularization, Optimization, and Beyond pages: 644, Adaptive Computation and Machine Learning, MIT Press, Cambridge, MA, USA, December 2002, Parts of this book, including an introduction to kernel methods, can be downloaded here. (book)

Transductive Learning: Motivation, Models, Algorithms

Bousquet, O.

January 2002 (talk)

Bousquet, O. Transductive Learning: Motivation, Models, Algorithms January 2002 (talk)