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2018


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Phylogenetic convolutional neural networks in metagenomics

Fioravanti*, D., Giarratano*, Y., Maggio*, V., Agostinelli, C., Chierici, M., Jurman, G., Furlanello, C.

BMC Bioinformatics, 19(2):49 pages, 2018, *equal contribution (article)

DOI [BibTex]

2018

DOI [BibTex]


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Food specific inhibitory control under negative mood in binge-eating disorder: Evidence from a multimethod approach

Leehr, E. J., Schag, K., Dresler, T., Grosse-Wentrup, M., Hautzinger, M., Fallgatter, A. J., Zipfel, S., Giel, K. E., Ehlis, A.

International Journal of Eating Disorders, 51(2):112-123, Wiley Online Library, 2018 (article)

DOI [BibTex]

DOI [BibTex]


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Linking imaging to omics utilizing image-guided tissue extraction

Disselhorst, J. A., Krueger, M. A., Ud-Dean, S. M. M., Bezrukov, I., Jarboui, M. A., Trautwein, C., Traube, A., Spindler, C., Cotton, J. M., Leibfritz, D., Pichler, B. J.

Proceedings of the National Academy of Sciences, 115(13):E2980-E2987, 2018 (article)

DOI [BibTex]

DOI [BibTex]


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Discriminative Transfer Learning for General Image Restoration

Xiao, L., Heide, F., Heidrich, W., Schölkopf, B., Hirsch, M.

IEEE Transactions on Image Processing, 27(8):4091-4104, 2018 (article)

DOI [BibTex]

DOI [BibTex]


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Dissecting the synapse- and frequency-dependent network mechanisms of in vivo hippocampal sharp wave-ripples

Ramirez-Villegas, J. F., Willeke, K. F., Logothetis, N. K., Besserve, M.

Neuron, 100(5):1224-1240, 2018 (article)

link (url) DOI Project Page [BibTex]

link (url) DOI Project Page [BibTex]


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Two-qubit causal structures and the geometry of positive qubit-maps

Kübler, J. M., Braun, D.

New Journal of Physics, 20(8):083015, 2018 (article)

link (url) DOI [BibTex]

link (url) DOI [BibTex]


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In-Hand Object Stabilization by Independent Finger Control

Veiga, F. F., Edin, B. B., Peters, J.

IEEE Transactions on Robotics, 2018 (article) Submitted

Project Page [BibTex]

Project Page [BibTex]


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Visualizing and understanding Sum-Product Networks

Vergari, A., Di Mauro, N., Esposito, F.

Machine Learning, 2018 (article)

DOI [BibTex]

DOI [BibTex]


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Non-Equilibrium Relations for Bounded Rational Decision-Making in Changing Environments

Grau-Moya, J, Krüger, M, Braun, DA

Entropy, 20(1:1):1-28, January 2018 (article)

Abstract
Living organisms from single cells to humans need to adapt continuously to respond to changes in their environment. The process of behavioural adaptation can be thought of as improving decision-making performance according to some utility function. Here, we consider an abstract model of organisms as decision-makers with limited information-processing resources that trade off between maximization of utility and computational costs measured by a relative entropy, in a similar fashion to thermodynamic systems undergoing isothermal transformations. Such systems minimize the free energy to reach equilibrium states that balance internal energy and entropic cost. When there is a fast change in the environment, these systems evolve in a non-equilibrium fashion because they are unable to follow the path of equilibrium distributions. Here, we apply concepts from non-equilibrium thermodynamics to characterize decision-makers that adapt to changing environments under the assumption that the temporal evolution of the utility function is externally driven and does not depend on the decision-maker’s action. This allows one to quantify performance loss due to imperfect adaptation in a general manner and, additionally, to find relations for decision-making similar to Crooks’ fluctuation theorem and Jarzynski’s equality. We provide simulations of several exemplary decision and inference problems in the discrete and continuous domains to illustrate the new relations.

DOI [BibTex]

DOI [BibTex]

2017


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Generalized exploration in policy search

van Hoof, H., Tanneberg, D., Peters, J.

Machine Learning, 106(9-10):1705-1724 , (Editors: Kurt Driessens, Dragi Kocev, Marko Robnik‐Sikonja, and Myra Spiliopoulou), October 2017, Special Issue of the ECML PKDD 2017 Journal Track (article)

DOI Project Page [BibTex]

2017

DOI Project Page [BibTex]


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Probabilistic Prioritization of Movement Primitives

Paraschos, A., Lioutikov, R., Peters, J., Neumann, G.

Proceedings of the International Conference on Intelligent Robot Systems, and IEEE Robotics and Automation Letters (RA-L), 2(4):2294-2301, October 2017 (article)

link (url) DOI [BibTex]

link (url) DOI [BibTex]


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Ecological feedback in quorum-sensing microbial populations can induce heterogeneous production of autoinducers

Bauer*, M., Knebel*, J., Lechner, M., Pickl, P., Frey, E.

{eLife}, July 2017, *equal contribution (article)

DOI [BibTex]

DOI [BibTex]


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Learning Movement Primitive Libraries through Probabilistic Segmentation

Lioutikov, R., Neumann, G., Maeda, G., Peters, J.

International Journal of Robotics Research, 36(8):879-894, July 2017 (article)

DOI Project Page [BibTex]

DOI Project Page [BibTex]


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Guiding Trajectory Optimization by Demonstrated Distributions

Osa, T., Ghalamzan E., A. M., Stolkin, R., Lioutikov, R., Peters, J., Neumann, G.

IEEE Robotics and Automation Letters, 2(2):819-826, April 2017 (article)

DOI [BibTex]

DOI [BibTex]


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Whole-body multi-contact motion in humans and humanoids: Advances of the CoDyCo European project

Padois, V., Ivaldi, S., Babic, J., Mistry, M., Peters, J., Nori, F.

Robotics and Autonomous Systems, 90, pages: 97-117, April 2017, Special Issue on New Research Frontiers for Intelligent Autonomous Systems (article)

DOI Project Page [BibTex]

DOI Project Page [BibTex]


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Probabilistic Movement Primitives for Coordination of Multiple Human-Robot Collaborative Tasks

Maeda, G., Neumann, G., Ewerton, M., Lioutikov, R., Kroemer, O., Peters, J.

Autonomous Robots, 41(3):593-612, March 2017 (article)

DOI Project Page [BibTex]

DOI Project Page [BibTex]


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Bioinspired tactile sensor for surface roughness discrimination

Yi, Z., Zhang, Y., Peters, J.

Sensors and Actuators A: Physical, 255, pages: 46-53, March 2017 (article)

DOI Project Page [BibTex]

DOI Project Page [BibTex]


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Model-based Contextual Policy Search for Data-Efficient Generalization of Robot Skills

Kupcsik, A., Deisenroth, M., Peters, J., Ai Poh, L., Vadakkepat, V., Neumann, G.

Artificial Intelligence, 247, pages: 415-439, 2017, Special Issue on AI and Robotics (article)

link (url) DOI Project Page [BibTex]

link (url) DOI Project Page [BibTex]


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Anticipatory Action Selection for Human-Robot Table Tennis

Wang, Z., Boularias, A., Mülling, K., Schölkopf, B., Peters, J.

Artificial Intelligence, 247, pages: 399-414, 2017, Special Issue on AI and Robotics (article)

Abstract
Abstract Anticipation can enhance the capability of a robot in its interaction with humans, where the robot predicts the humans' intention for selecting its own action. We present a novel framework of anticipatory action selection for human-robot interaction, which is capable to handle nonlinear and stochastic human behaviors such as table tennis strokes and allows the robot to choose the optimal action based on prediction of the human partner's intention with uncertainty. The presented framework is generic and can be used in many human-robot interaction scenarios, for example, in navigation and human-robot co-manipulation. In this article, we conduct a case study on human-robot table tennis. Due to the limited amount of time for executing hitting movements, a robot usually needs to initiate its hitting movement before the opponent hits the ball, which requires the robot to be anticipatory based on visual observation of the opponent's movement. Previous work on Intention-Driven Dynamics Models (IDDM) allowed the robot to predict the intended target of the opponent. In this article, we address the problem of action selection and optimal timing for initiating a chosen action by formulating the anticipatory action selection as a Partially Observable Markov Decision Process (POMDP), where the transition and observation are modeled by the \{IDDM\} framework. We present two approaches to anticipatory action selection based on the \{POMDP\} formulation, i.e., a model-free policy learning method based on Least-Squares Policy Iteration (LSPI) that employs the \{IDDM\} for belief updates, and a model-based Monte-Carlo Planning (MCP) method, which benefits from the transition and observation model by the IDDM. Experimental results using real data in a simulated environment show the importance of anticipatory action selection, and that \{POMDPs\} are suitable to formulate the anticipatory action selection problem by taking into account the uncertainties in prediction. We also show that existing algorithms for POMDPs, such as \{LSPI\} and MCP, can be applied to substantially improve the robot's performance in its interaction with humans.

DOI Project Page [BibTex]

DOI Project Page [BibTex]


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Kernel Mean Embedding of Distributions: A Review and Beyond

Muandet, K., Fukumizu, K., Sriperumbudur, B., Schölkopf, B.

Foundations and Trends in Machine Learning, 10(1-2):1-141, 2017 (article)

DOI Project Page [BibTex]

DOI Project Page [BibTex]


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Prediction of intention during interaction with iCub with Probabilistic Movement Primitives

Dermy, O., Paraschos, A., Ewerton, M., Charpillet, F., Peters, J., Ivaldi, S.

Frontiers in Robotics and AI, 4, pages: 45, 2017 (article)

DOI Project Page [BibTex]

DOI Project Page [BibTex]


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Manifold-based multi-objective policy search with sample reuse

Parisi, S., Pirotta, M., Peters, J.

Neurocomputing, 263, pages: 3-14, (Editors: Madalina Drugan, Marco Wiering, Peter Vamplew, and Madhu Chetty), 2017, Special Issue on Multi-Objective Reinforcement Learning (article)

DOI Project Page [BibTex]

DOI Project Page [BibTex]


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easyGWAS: A Cloud-based Platform for Comparing the Results of Genome-wide Association Studies

Grimm, D., Roqueiro, D., Salome, P., Kleeberger, S., Greshake, B., Zhu, W., Liu, C., Lippert, C., Stegle, O., Schölkopf, B., Weigel, D., Borgwardt, K.

The Plant Cell, 29(1):5-19, 2017 (article)

link (url) DOI [BibTex]

link (url) DOI [BibTex]


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A Novel Unsupervised Segmentation Approach Quantifies Tumor Tissue Populations Using Multiparametric MRI: First Results with Histological Validation

Katiyar, P., Divine, M. R., Kohlhofer, U., Quintanilla-Martinez, L., Schölkopf, B., Pichler, B. J., Disselhorst, J. A.

Molecular Imaging and Biology, 19(3):391-397, 2017 (article)

DOI [BibTex]

DOI [BibTex]


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Minimax Estimation of Kernel Mean Embeddings

Tolstikhin, I., Sriperumbudur, B., Muandet, K.

Journal of Machine Learning Research, 18(86):1-47, 2017 (article)

link (url) Project Page [BibTex]


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Temporal evolution of the central fixation bias in scene viewing

Rothkegel, L. O. M., Trukenbrod, H. A., Schütt, H. H., Wichmann, F. A., Engbert, R.

Journal of Vision, 17(13):3, 2017 (article)

DOI Project Page [BibTex]

DOI Project Page [BibTex]


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Spectral Clustering predicts tumor tissue heterogeneity using dynamic 18F-FDG PET: a complement to the standard compartmental modeling approach

Katiyar, P., Divine, M. R., Kohlhofer, U., Quintanilla-Martinez, L., Schölkopf, B., Pichler, B. J., Disselhorst, J. A.

Journal of Nuclear Medicine, 58(4):651-657, 2017 (article)

link (url) DOI [BibTex]

link (url) DOI [BibTex]


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Electroencephalographic identifiers of motor adaptation learning

Ozdenizci, O., Yalcin, M., Erdogan, A., Patoglu, V., Grosse-Wentrup, M., Cetin, M.

Journal of Neural Engineering, 14(4):046027, 2017 (article)

link (url) [BibTex]

link (url) [BibTex]


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Detecting distortions of peripherally presented letter stimuli under crowded conditions

Wallis, T. S. A., Tobias, S., Bethge, M., Wichmann, F. A.

Attention, Perception, & Psychophysics, 79(3):850-862, 2017 (article)

DOI Project Page [BibTex]

DOI Project Page [BibTex]


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BundleMAP: Anatomically Localized Classification, Regression, and Hypothesis Testing in Diffusion MRI

Khatami, M., Schmidt-Wilcke, T., Sundgren, P. C., Abbasloo, A., Schölkopf, B., Schultz, T.

Pattern Recognition, 63, pages: 593-600, 2017 (article)

DOI [BibTex]

DOI [BibTex]


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A parametric texture model based on deep convolutional features closely matches texture appearance for humans

Wallis, T. S. A., Funke, C. M., Ecker, A. S., Gatys, L. A., Wichmann, F. A., Bethge, M.

Journal of Vision, 17(12), 2017 (article)

DOI Project Page [BibTex]

DOI Project Page [BibTex]


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An image-computable psychophysical spatial vision model

Schütt, H. H., Wichmann, F. A.

Journal of Vision, 17(12), 2017 (article)

DOI Project Page [BibTex]

DOI Project Page [BibTex]


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Methods and measurements to compare men against machines

Wichmann, F. A., Janssen, D. H. J., Geirhos, R., Aguilar, G., Schütt, H. H., Maertens, M., Bethge, M.

Electronic Imaging, pages: 36-45(10), 2017 (article)

DOI [BibTex]

DOI [BibTex]


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A Comparison of Autoregressive Hidden Markov Models for Multimodal Manipulations With Variable Masses

Kroemer, O., Peters, J.

IEEE Robotics and Automation Letters, 2(2):1101-1108, 2017 (article)

DOI [BibTex]

DOI [BibTex]


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Phase Estimation for Fast Action Recognition and Trajectory Generation in Human-Robot Collaboration

Maeda, G., Ewerton, M., Neumann, G., Lioutikov, R., Peters, J.

International Journal of Robotics Research, 36(13-14):1579-1594, 2017, Special Issue on the Seventeenth International Symposium on Robotics Research (article)

DOI Project Page [BibTex]

DOI Project Page [BibTex]


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Model Selection for Gaussian Mixture Models

Huang, T., Peng, H., Zhang, K.

Statistica Sinica, 27(1):147-169, 2017 (article)

link (url) [BibTex]

link (url) [BibTex]


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A Phase-coded Aperture Camera with Programmable Optics

Chen, J., Hirsch, M., Heintzmann, R., Eberhardt, B., Lensch, H. P. A.

Electronic Imaging, 2017(17):70-75, 2017 (article)

DOI [BibTex]

DOI [BibTex]


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On Maximum Entropy and Inference

Gresele, L., Marsili, M.

Entropy, 19(12):article no. 642, 2017 (article)

link (url) [BibTex]

link (url) [BibTex]


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Towards Engagement Models that Consider Individual Factors in HRI: On the Relation of Extroversion and Negative Attitude Towards Robots to Gaze and Speech During a Human-Robot Assembly Task

Ivaldi, S., Lefort, S., Peters, J., Chetouani, M., Provasi, J., Zibetti, E.

International Journal of Social Robotics, 9(1):63-86, 2017 (article)

DOI [BibTex]


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Non-parametric Policy Search with Limited Information Loss

van Hoof, H., Neumann, G., Peters, J.

Journal of Machine Learning Research , 18(73):1-46, 2017 (article)

link (url) Project Page [BibTex]

link (url) Project Page [BibTex]


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Stability of Controllers for Gaussian Process Dynamics

Vinogradska, J., Bischoff, B., Nguyen-Tuong, D., Peters, J.

Journal of Machine Learning Research, 18(100):1-37, 2017 (article)

link (url) Project Page [BibTex]

link (url) Project Page [BibTex]


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SUV-quantification of physiological lung tissue in an integrated PET/MR-system: Impact of lung density and bone tissue

Seith, F., Schmidt, H., Gatidis, S., Bezrukov, I., Schraml, C., Pfannenberg, C., la Fougère, C., Nikolaou, K., Schwenzer, N.

PLOS ONE, 12(5):1-13, 2017 (article)

DOI [BibTex]

DOI [BibTex]